Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SRMP19623 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.79■□□□□ 0.76
SRMP19623 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.79■□□□□ 0.76
SRMP19623 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SRMP19623 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRMP19623 AC137767.1-201ENST00000602918 1920 ntBASIC19.78■□□□□ 0.76
SRMP19623 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRMP19623 MIR639-201ENST00000384974 98 ntBASIC19.78■□□□□ 0.76
SRMP19623 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.78■□□□□ 0.76
SRMP19623 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.78■□□□□ 0.76
SRMP19623 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SRMP19623 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SRMP19623 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.78■□□□□ 0.76
SRMP19623 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRMP19623 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRMP19623 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SRMP19623 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRMP19623 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRMP19623 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SRMP19623 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SRMP19623 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.77■□□□□ 0.76
SRMP19623 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.77■□□□□ 0.76
SRMP19623 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SRMP19623 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRMP19623 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRMP19623 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SRMP19623 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SRMP19623 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.77■□□□□ 0.76
SRMP19623 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SRMP19623 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SRMP19623 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.76■□□□□ 0.75
SRMP19623 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SRMP19623 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SRMP19623 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.76■□□□□ 0.75
SRMP19623 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 AL022069.1-201ENST00000568025 1636 ntBASIC19.76■□□□□ 0.75
SRMP19623 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SRMP19623 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRMP19623 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRMP19623 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.75■□□□□ 0.75
SRMP19623 RPS2P7-201ENST00000447334 885 ntBASIC19.75■□□□□ 0.75
SRMP19623 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRMP19623 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SRMP19623 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SRMP19623 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.75■□□□□ 0.75
SRMP19623 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SRMP19623 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.74■□□□□ 0.75
SRMP19623 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.74■□□□□ 0.75
SRMP19623 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.74■□□□□ 0.75
SRMP19623 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.74■□□□□ 0.75
SRMP19623 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SRMP19623 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SRMP19623 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRMP19623 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SRMP19623 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRMP19623 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SRMP19623 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SRMP19623 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRMP19623 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SRMP19623 AL592295.1-201ENST00000400984 884 ntBASIC19.73■□□□□ 0.75
SRMP19623 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SRMP19623 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.73■□□□□ 0.75
SRMP19623 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SRMP19623 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.72■□□□□ 0.75
SRMP19623 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.72■□□□□ 0.75
SRMP19623 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.72■□□□□ 0.75
SRMP19623 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
SRMP19623 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.72■□□□□ 0.75
SRMP19623 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SRMP19623 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.71■□□□□ 0.75
SRMP19623 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
SRMP19623 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms