Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 RSC2YLR357W 2670 nt4.75□□□□□ -1.65
CDC43P18898 MSY1YPL097W 1479 nt4.75□□□□□ -1.65
CDC43P18898 ASN1YPR145W 1719 nt4.75□□□□□ -1.65
CDC43P18898 RET1YOR207C 3450 nt4.74□□□□□ -1.65
CDC43P18898 UIP5YKR044W 1332 nt4.74□□□□□ -1.65
CDC43P18898 GUP2YPL189W 1830 nt4.74□□□□□ -1.65
CDC43P18898 GYP1YOR070C 1914 nt4.74□□□□□ -1.65
CDC43P18898 UTP7YER082C 1665 nt4.74□□□□□ -1.65
CDC43P18898 CNE1YAL058W 1509 nt4.74□□□□□ -1.65
CDC43P18898 YDL016CYDL016C 303 nt4.74□□□□□ -1.65
CDC43P18898 RPT3YDR394W 1287 nt4.74□□□□□ -1.65
CDC43P18898 YDR445CYDR445C 408 nt4.74□□□□□ -1.65
CDC43P18898 AGX1YFL030W 1158 nt4.74□□□□□ -1.65
CDC43P18898 DOC1YGL240W 753 nt4.74□□□□□ -1.65
CDC43P18898 PRP38YGR075C 729 nt4.74□□□□□ -1.65
CDC43P18898 PFS1YHR185C 714 nt4.74□□□□□ -1.65
CDC43P18898 COA1YIL157C 594 nt4.74□□□□□ -1.65
CDC43P18898 REC107YJR021C 945 nt4.74□□□□□ -1.65
CDC43P18898 SRT1YMR101C 1032 nt4.74□□□□□ -1.65
CDC43P18898 YMR135W-AYMR135W-A 534 nt4.74□□□□□ -1.65
CDC43P18898 SNF8YPL002C 702 nt4.74□□□□□ -1.65
CDC43P18898 YBR287WYBR287W 1284 nt4.74□□□□□ -1.65
CDC43P18898 YHR020WYHR020W 2067 nt4.74□□□□□ -1.65
CDC43P18898 CNA1YLR433C 1662 nt4.73□□□□□ -1.65
CDC43P18898 SKS1YPL026C 1509 nt4.73□□□□□ -1.65
CDC43P18898 YCK1YHR135C 1617 nt4.73□□□□□ -1.65
CDC43P18898 KIN28YDL108W 921 nt4.73□□□□□ -1.65
CDC43P18898 CAD1YDR423C 1230 nt4.73□□□□□ -1.65
CDC43P18898 FOL2YGR267C 732 nt4.73□□□□□ -1.65
CDC43P18898 COS8YHL048W 1146 nt4.73□□□□□ -1.65
CDC43P18898 YKL223WYKL223W 333 nt4.73□□□□□ -1.65
CDC43P18898 NRK1YNL129W 723 nt4.73□□□□□ -1.65
CDC43P18898 YNR040WYNR040W 771 nt4.73□□□□□ -1.65
CDC43P18898 COQ3YOL096C 939 nt4.73□□□□□ -1.65
CDC43P18898 YOR268CYOR268C 399 nt4.73□□□□□ -1.65
CDC43P18898 YOR364WYOR364W 369 nt4.73□□□□□ -1.65
CDC43P18898 YTM1YOR272W 1383 nt4.73□□□□□ -1.65
CDC43P18898 SPT14YPL175W 1359 nt4.73□□□□□ -1.65
CDC43P18898 VBA1YMR088C 1689 nt4.73□□□□□ -1.65
CDC43P18898 ATC1YDR184C 885 nt4.72□□□□□ -1.65
CDC43P18898 SRB7YDR308C 423 nt4.72□□□□□ -1.65
CDC43P18898 IPK1YDR315C 846 nt4.72□□□□□ -1.65
CDC43P18898 PRP21YJL203W 843 nt4.72□□□□□ -1.65
CDC43P18898 FIP1YJR093C 984 nt4.72□□□□□ -1.65
CDC43P18898 NYV1YLR093C 762 nt4.72□□□□□ -1.65
CDC43P18898 TIS11YLR136C 858 nt4.72□□□□□ -1.65
CDC43P18898 QRI5YLR204W 336 nt4.72□□□□□ -1.65
CDC43P18898 RPL31BYLR406C 342 nt4.72□□□□□ -1.65
CDC43P18898 RRG9YNL213C 645 nt4.72□□□□□ -1.65
CDC43P18898 BUD21YOR078W 645 nt4.72□□□□□ -1.65
CDC43P18898 RKI1YOR095C 777 nt4.72□□□□□ -1.65
CDC43P18898 UIP4YPL186C 915 nt4.72□□□□□ -1.65
CDC43P18898 RXT2YBR095C 1293 nt4.72□□□□□ -1.65
CDC43P18898 ALG9YNL219C 1668 nt4.72□□□□□ -1.65
CDC43P18898 ERC1YHR032W 1746 nt4.72□□□□□ -1.65
CDC43P18898 TAF8YML114C 1533 nt4.72□□□□□ -1.65
CDC43P18898 MRS2YOR334W 1413 nt4.72□□□□□ -1.65
CDC43P18898 ACC1YNR016C 6702 nt4.71□□□□□ -1.66
CDC43P18898 NSA1YGL111W 1392 nt4.71□□□□□ -1.66
CDC43P18898 MGA1YGR249W 1371 nt4.71□□□□□ -1.66
CDC43P18898 DAS2YDR020C 699 nt4.71□□□□□ -1.66
CDC43P18898 YDR056CYDR056C 618 nt4.71□□□□□ -1.66
CDC43P18898 YGR149WYGR149W 1299 nt4.71□□□□□ -1.66
CDC43P18898 RTA1YGR213C 954 nt4.71□□□□□ -1.66
CDC43P18898 YHR214C-DYHR214C-D 294 nt4.71□□□□□ -1.66
CDC43P18898 AIM19YIL087C 474 nt4.71□□□□□ -1.66
CDC43P18898 YJL193WYJL193W 1209 nt4.71□□□□□ -1.66
CDC43P18898 CPR7YJR032W 1182 nt4.71□□□□□ -1.66
CDC43P18898 VPS25YJR102C 609 nt4.71□□□□□ -1.66
CDC43P18898 YAR069CYAR069C 294 nt4.71□□□□□ -1.66
CDC43P18898 SEC17YBL050W 879 nt4.71□□□□□ -1.66
CDC43P18898 TMA46YOR091W 1038 nt4.71□□□□□ -1.66
CDC43P18898 IRC13YOR235W 315 nt4.71□□□□□ -1.66
CDC43P18898 NHP6BYBR089C-A 300 nt4.71□□□□□ -1.66
CDC43P18898 snR44snR44 211 nt4.71□□□□□ -1.66
CDC43P18898 TRM1YDR120C 1713 nt4.71□□□□□ -1.66
CDC43P18898 EDE1YBL047C 4146 nt4.71□□□□□ -1.66
CDC43P18898 SIT1YEL065W 1887 nt4.71□□□□□ -1.66
CDC43P18898 RIM101YHL027W 1878 nt4.71□□□□□ -1.66
CDC43P18898 RRN3YKL125W 1884 nt4.71□□□□□ -1.66
CDC43P18898 VPS1YKR001C 2115 nt4.7□□□□□ -1.66
CDC43P18898 ERT1YBR239C 1590 nt4.7□□□□□ -1.66
CDC43P18898 CPR4YCR069W 957 nt4.7□□□□□ -1.66
CDC43P18898 YDR524W-CYDR524W-C 90 nt4.7□□□□□ -1.66
CDC43P18898 tL(UAA)B1tL(UAA)B1 84 nt4.7□□□□□ -1.66
CDC43P18898 tL(UAA)B2tL(UAA)B2 84 nt4.7□□□□□ -1.66
CDC43P18898 tL(UAA)DtL(UAA)D 84 nt4.7□□□□□ -1.66
CDC43P18898 SUP51tL(UAA)J 84 nt4.7□□□□□ -1.66
CDC43P18898 tL(UAA)KtL(UAA)K 84 nt4.7□□□□□ -1.66
CDC43P18898 tL(UAA)LtL(UAA)L 84 nt4.7□□□□□ -1.66
CDC43P18898 tL(UAA)NtL(UAA)N 84 nt4.7□□□□□ -1.66
CDC43P18898 MF(ALPHA)2YGL089C 363 nt4.7□□□□□ -1.66
CDC43P18898 SEH1YGL100W 1050 nt4.7□□□□□ -1.66
CDC43P18898 YGL185CYGL185C 1140 nt4.7□□□□□ -1.66
CDC43P18898 YGR016WYGR016W 573 nt4.7□□□□□ -1.66
CDC43P18898 PTI1YGR156W 1278 nt4.7□□□□□ -1.66
CDC43P18898 PPX1YHR201C 1194 nt4.7□□□□□ -1.66
CDC43P18898 RFC2YJR068W 1062 nt4.7□□□□□ -1.66
CDC43P18898 GAT3YLR013W 426 nt4.7□□□□□ -1.66
CDC43P18898 FUS3YBL016W 1062 nt4.7□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms