Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCL4P13236 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.63■■□□□ 1.05
CCL4P13236 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL4P13236 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL4P13236 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCL4P13236 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL4P13236 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCL4P13236 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.62■■□□□ 1.05
CCL4P13236 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.62■■□□□ 1.05
CCL4P13236 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL4P13236 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL4P13236 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL4P13236 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.61■■□□□ 1.05
CCL4P13236 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL4P13236 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCL4P13236 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCL4P13236 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCL4P13236 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCL4P13236 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCL4P13236 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.6■■□□□ 1.05
CCL4P13236 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL4P13236 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL4P13236 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.6■■□□□ 1.05
CCL4P13236 AC233992.3-201ENST00000607491 485 ntBASIC21.6■■□□□ 1.05
CCL4P13236 AL161729.1-201ENST00000604104 1402 ntBASIC21.6■■□□□ 1.05
CCL4P13236 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCL4P13236 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCL4P13236 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL4P13236 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.59■■□□□ 1.05
CCL4P13236 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL4P13236 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL4P13236 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL4P13236 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL4P13236 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.58■■□□□ 1.05
CCL4P13236 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCL4P13236 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCL4P13236 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.58■■□□□ 1.05
CCL4P13236 BX842568.3-201ENST00000418104 571 ntBASIC21.58■■□□□ 1.05
CCL4P13236 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.58■■□□□ 1.05
CCL4P13236 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.58■■□□□ 1.05
CCL4P13236 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCL4P13236 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCL4P13236 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCL4P13236 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCL4P13236 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCL4P13236 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL4P13236 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL4P13236 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCL4P13236 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCL4P13236 AL162430.1-201ENST00000480705 870 ntBASIC21.57■■□□□ 1.04
CCL4P13236 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.57■■□□□ 1.04
CCL4P13236 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CCL4P13236 pRNA.6-201ENST00000610482 90 ntBASIC21.57■■□□□ 1.04
CCL4P13236 pRNA.5-201ENST00000612139 90 ntBASIC21.57■■□□□ 1.04
CCL4P13236 pRNA.11-201ENST00000618423 90 ntBASIC21.57■■□□□ 1.04
CCL4P13236 pRNA.13-201ENST00000619112 90 ntBASIC21.57■■□□□ 1.04
CCL4P13236 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL4P13236 ALDH1A3-203ENST00000557963 1670 ntBASIC21.56■■□□□ 1.04
CCL4P13236 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.56■■□□□ 1.04
CCL4P13236 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCL4P13236 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.56■■□□□ 1.04
CCL4P13236 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.56■■□□□ 1.04
CCL4P13236 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.56■■□□□ 1.04
CCL4P13236 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL4P13236 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL4P13236 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL4P13236 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.55■■□□□ 1.04
CCL4P13236 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL4P13236 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.55■■□□□ 1.04
CCL4P13236 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL4P13236 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.55■■□□□ 1.04
CCL4P13236 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL4P13236 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL4P13236 AC135731.1-201ENST00000569415 2548 ntBASIC21.55■■□□□ 1.04
CCL4P13236 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.55■■□□□ 1.04
CCL4P13236 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCL4P13236 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCL4P13236 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL4P13236 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.54■■□□□ 1.04
CCL4P13236 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL4P13236 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CCL4P13236 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.54■■□□□ 1.04
CCL4P13236 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL4P13236 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL4P13236 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL4P13236 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL4P13236 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL4P13236 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL4P13236 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL4P13236 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL4P13236 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL4P13236 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL4P13236 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL4P13236 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL4P13236 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL4P13236 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL4P13236 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCL4P13236 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms