Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HOXC6P09630 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
HOXC6P09630 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HOXC6P09630 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HOXC6P09630 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
HOXC6P09630 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.87■■□□□ 1.73
HOXC6P09630 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.87■■□□□ 1.73
HOXC6P09630 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.87■■□□□ 1.73
HOXC6P09630 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.87■■□□□ 1.73
HOXC6P09630 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
HOXC6P09630 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.86■■□□□ 1.73
HOXC6P09630 YBX1P1-201ENST00000445822 960 ntBASIC25.86■■□□□ 1.73
HOXC6P09630 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HOXC6P09630 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
HOXC6P09630 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.86■■□□□ 1.73
HOXC6P09630 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HOXC6P09630 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
HOXC6P09630 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HOXC6P09630 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.85■■□□□ 1.73
HOXC6P09630 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.85■■□□□ 1.73
HOXC6P09630 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HOXC6P09630 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HOXC6P09630 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
HOXC6P09630 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.85■■□□□ 1.73
HOXC6P09630 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.85■■□□□ 1.73
HOXC6P09630 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HOXC6P09630 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HOXC6P09630 RARRES2P11-201ENST00000635158 484 ntBASIC25.84■■□□□ 1.73
HOXC6P09630 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
HOXC6P09630 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.83■■□□□ 1.73
HOXC6P09630 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HOXC6P09630 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.83■■□□□ 1.73
HOXC6P09630 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HOXC6P09630 AC022517.1-201ENST00000592429 346 ntBASIC25.83■■□□□ 1.73
HOXC6P09630 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HOXC6P09630 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.83■■□□□ 1.73
HOXC6P09630 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
HOXC6P09630 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
HOXC6P09630 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
HOXC6P09630 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HOXC6P09630 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HOXC6P09630 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HOXC6P09630 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
HOXC6P09630 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.82■■□□□ 1.72
HOXC6P09630 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.82■■□□□ 1.72
HOXC6P09630 pRNA.6-201ENST00000610482 90 ntBASIC25.82■■□□□ 1.72
HOXC6P09630 pRNA.5-201ENST00000612139 90 ntBASIC25.82■■□□□ 1.72
HOXC6P09630 pRNA.11-201ENST00000618423 90 ntBASIC25.82■■□□□ 1.72
HOXC6P09630 pRNA.13-201ENST00000619112 90 ntBASIC25.82■■□□□ 1.72
HOXC6P09630 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HOXC6P09630 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.82■■□□□ 1.72
HOXC6P09630 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
HOXC6P09630 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
HOXC6P09630 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
HOXC6P09630 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
HOXC6P09630 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.81■■□□□ 1.72
HOXC6P09630 AC126544.1-201ENST00000580842 1059 ntBASIC25.81■■□□□ 1.72
HOXC6P09630 AL031602.1-201ENST00000633169 911 ntBASIC25.81■■□□□ 1.72
HOXC6P09630 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
HOXC6P09630 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.8■■□□□ 1.72
HOXC6P09630 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HOXC6P09630 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
HOXC6P09630 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
HOXC6P09630 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.8■■□□□ 1.72
HOXC6P09630 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.8■■□□□ 1.72
HOXC6P09630 KRT18P5-201ENST00000436075 1291 ntBASIC25.8■■□□□ 1.72
HOXC6P09630 AC090192.1-201ENST00000517740 490 ntBASIC25.8■■□□□ 1.72
HOXC6P09630 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
HOXC6P09630 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
HOXC6P09630 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
HOXC6P09630 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
HOXC6P09630 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
HOXC6P09630 IKBKGP1-201ENST00000612193 1073 ntBASIC25.79■■□□□ 1.72
HOXC6P09630 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
HOXC6P09630 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.78■■□□□ 1.72
HOXC6P09630 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
HOXC6P09630 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.78■■□□□ 1.72
HOXC6P09630 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.78■■□□□ 1.72
HOXC6P09630 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.78■■□□□ 1.72
HOXC6P09630 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HOXC6P09630 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
HOXC6P09630 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.78■■□□□ 1.72
HOXC6P09630 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.78■■□□□ 1.72
HOXC6P09630 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
HOXC6P09630 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
HOXC6P09630 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.77■■□□□ 1.72
HOXC6P09630 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.77■■□□□ 1.72
HOXC6P09630 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.77■■□□□ 1.72
HOXC6P09630 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HOXC6P09630 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HOXC6P09630 AC027612.3-201ENST00000413684 1047 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
HOXC6P09630 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.77■■□□□ 1.72
HOXC6P09630 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.77■■□□□ 1.72
HOXC6P09630 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.77■■□□□ 1.72
HOXC6P09630 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4L2-201ENST00000561772 1275 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4L6-201ENST00000626483 1275 ntBASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms