Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TYMSP04818 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TYMSP04818 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TYMSP04818 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TYMSP04818 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.41■□□□□ 0.38
TYMSP04818 AL157400.5-201ENST00000507624 621 ntBASIC17.41■□□□□ 0.38
TYMSP04818 ANOS2P-203ENST00000472227 1816 ntBASIC17.41■□□□□ 0.38
TYMSP04818 AC242852.2-201ENST00000615738 1807 ntBASIC17.41■□□□□ 0.38
TYMSP04818 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TYMSP04818 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TYMSP04818 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.4■□□□□ 0.38
TYMSP04818 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.4■□□□□ 0.38
TYMSP04818 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.4■□□□□ 0.38
TYMSP04818 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.4■□□□□ 0.38
TYMSP04818 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TYMSP04818 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TYMSP04818 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TYMSP04818 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.4■□□□□ 0.38
TYMSP04818 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TYMSP04818 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 AC073130.3-201ENST00000624389 2278 ntBASIC17.39■□□□□ 0.37
TYMSP04818 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.39■□□□□ 0.37
TYMSP04818 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TYMSP04818 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TYMSP04818 AC092068.2-201ENST00000590491 1708 ntBASIC17.38■□□□□ 0.37
TYMSP04818 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TYMSP04818 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TYMSP04818 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.38■□□□□ 0.37
TYMSP04818 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.38■□□□□ 0.37
TYMSP04818 AC025884.2-201ENST00000553429 711 ntBASIC17.38■□□□□ 0.37
TYMSP04818 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.38■□□□□ 0.37
TYMSP04818 AC092667.1-201ENST00000434301 2586 ntBASIC17.38■□□□□ 0.37
TYMSP04818 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.38■□□□□ 0.37
TYMSP04818 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.38■□□□□ 0.37
TYMSP04818 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TYMSP04818 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TYMSP04818 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TYMSP04818 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TYMSP04818 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TYMSP04818 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.37■□□□□ 0.37
TYMSP04818 AC060814.1-201ENST00000554326 538 ntBASIC17.37■□□□□ 0.37
TYMSP04818 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.37■□□□□ 0.37
TYMSP04818 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TYMSP04818 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
TYMSP04818 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 MIR3960-201ENST00000583311 91 ntBASIC17.36■□□□□ 0.37
TYMSP04818 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TYMSP04818 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.36■□□□□ 0.37
TYMSP04818 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TYMSP04818 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TYMSP04818 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.35■□□□□ 0.37
TYMSP04818 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.35■□□□□ 0.37
TYMSP04818 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TYMSP04818 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TYMSP04818 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms