Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.75■□□□□ 0.91
P04436 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
P04436 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.75■□□□□ 0.91
P04436 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04436 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.74■□□□□ 0.91
P04436 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.74■□□□□ 0.91
P04436 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
P04436 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.74■□□□□ 0.91
P04436 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
P04436 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04436 LINC01124-201ENST00000409786 2117 ntBASIC20.74■□□□□ 0.91
P04436 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
P04436 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04436 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04436 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.73■□□□□ 0.91
P04436 DUX4L19-201ENST00000557448 1267 ntBASIC20.73■□□□□ 0.91
P04436 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04436 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04436 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.72■□□□□ 0.91
P04436 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
P04436 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 AC110285.6-201ENST00000617652 491 ntBASIC20.72■□□□□ 0.91
P04436 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
P04436 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04436 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P04436 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04436 LINC00543-201ENST00000567234 1845 ntBASIC20.71■□□□□ 0.91
P04436 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04436 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04436 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04436 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04436 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04436 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.7■□□□□ 0.9
P04436 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
P04436 UNC93B3-201ENST00000308076 687 ntBASIC20.7■□□□□ 0.9
P04436 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
P04436 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
P04436 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.7■□□□□ 0.9
P04436 AC019069.1-201ENST00000610008 1333 ntBASIC20.7■□□□□ 0.9
P04436 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.7■□□□□ 0.9
P04436 C17orf82-201ENST00000623772 1530 ntBASIC20.69■□□□□ 0.9
P04436 AL139125.2-201ENST00000623134 1869 ntBASIC20.69■□□□□ 0.9
P04436 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04436 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.69■□□□□ 0.9
P04436 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.69■□□□□ 0.9
P04436 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04436 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
P04436 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
P04436 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04436 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
P04436 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04436 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.69■□□□□ 0.9
P04436 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.68■□□□□ 0.9
P04436 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 MIR638-201ENST00000385237 100 ntBASIC20.68■□□□□ 0.9
P04436 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.68■□□□□ 0.9
P04436 PBX2P1-201ENST00000493219 1291 ntBASIC20.68■□□□□ 0.9
P04436 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 AC099791.2-201ENST00000605725 427 ntBASIC20.68■□□□□ 0.9
P04436 AC241377.3-202ENST00000626088 1088 ntBASIC20.68■□□□□ 0.9
P04436 AC241585.3-202ENST00000628937 1088 ntBASIC20.68■□□□□ 0.9
P04436 AC245100.8-202ENST00000629247 1058 ntBASIC20.68■□□□□ 0.9
P04436 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04436 SYT6-210ENST00000641643 1587 ntBASIC20.68■□□□□ 0.9
P04436 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
P04436 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
P04436 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.67■□□□□ 0.9
P04436 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
P04436 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.67■□□□□ 0.9
P04436 AL136162.1-201ENST00000607711 1078 ntBASIC20.67■□□□□ 0.9
P04436 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms