Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHRNA1P02708 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.94■■□□□ 1.58
CHRNA1P02708 AC097381.1-201ENST00000429019 1296 ntBASIC24.94■■□□□ 1.58
CHRNA1P02708 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CHRNA1P02708 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.94■■□□□ 1.58
CHRNA1P02708 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.94■■□□□ 1.58
CHRNA1P02708 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
CHRNA1P02708 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHRNA1P02708 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHRNA1P02708 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHRNA1P02708 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHRNA1P02708 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHRNA1P02708 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHRNA1P02708 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHRNA1P02708 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHRNA1P02708 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHRNA1P02708 ALDH1A3-203ENST00000557963 1670 ntBASIC24.92■■□□□ 1.58
CHRNA1P02708 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHRNA1P02708 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHRNA1P02708 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.92■■□□□ 1.58
CHRNA1P02708 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.92■■□□□ 1.58
CHRNA1P02708 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CHRNA1P02708 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CHRNA1P02708 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHRNA1P02708 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHRNA1P02708 IRS3P-201ENST00000223076 1006 ntBASIC24.91■■□□□ 1.58
CHRNA1P02708 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHRNA1P02708 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CHRNA1P02708 AC104564.3-201ENST00000582367 638 ntBASIC24.91■■□□□ 1.58
CHRNA1P02708 AC087623.3-201ENST00000607047 1098 ntBASIC24.91■■□□□ 1.58
CHRNA1P02708 AC233992.3-201ENST00000607491 485 ntBASIC24.91■■□□□ 1.58
CHRNA1P02708 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHRNA1P02708 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.9■■□□□ 1.58
CHRNA1P02708 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.9■■□□□ 1.58
CHRNA1P02708 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CHRNA1P02708 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHRNA1P02708 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.89■■□□□ 1.58
CHRNA1P02708 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHRNA1P02708 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.89■■□□□ 1.58
CHRNA1P02708 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.89■■□□□ 1.58
CHRNA1P02708 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.89■■□□□ 1.58
CHRNA1P02708 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.89■■□□□ 1.57
CHRNA1P02708 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHRNA1P02708 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
CHRNA1P02708 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.89■■□□□ 1.57
CHRNA1P02708 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHRNA1P02708 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHRNA1P02708 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHRNA1P02708 BX842568.3-201ENST00000418104 571 ntBASIC24.88■■□□□ 1.57
CHRNA1P02708 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.88■■□□□ 1.57
CHRNA1P02708 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CHRNA1P02708 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHRNA1P02708 AC022211.4-201ENST00000625094 2161 ntBASIC24.88■■□□□ 1.57
CHRNA1P02708 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CHRNA1P02708 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.88■■□□□ 1.57
CHRNA1P02708 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.88■■□□□ 1.57
CHRNA1P02708 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHRNA1P02708 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHRNA1P02708 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.87■■□□□ 1.57
CHRNA1P02708 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.87■■□□□ 1.57
CHRNA1P02708 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.87■■□□□ 1.57
CHRNA1P02708 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.87■■□□□ 1.57
CHRNA1P02708 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.87■■□□□ 1.57
CHRNA1P02708 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHRNA1P02708 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.86■■□□□ 1.57
CHRNA1P02708 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.86■■□□□ 1.57
CHRNA1P02708 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.86■■□□□ 1.57
CHRNA1P02708 pRNA.6-201ENST00000610482 90 ntBASIC24.86■■□□□ 1.57
CHRNA1P02708 pRNA.5-201ENST00000612139 90 ntBASIC24.86■■□□□ 1.57
CHRNA1P02708 pRNA.11-201ENST00000618423 90 ntBASIC24.86■■□□□ 1.57
CHRNA1P02708 pRNA.13-201ENST00000619112 90 ntBASIC24.86■■□□□ 1.57
CHRNA1P02708 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.86■■□□□ 1.57
CHRNA1P02708 AC135731.1-201ENST00000569415 2548 ntBASIC24.86■■□□□ 1.57
CHRNA1P02708 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHRNA1P02708 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.85■■□□□ 1.57
CHRNA1P02708 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.85■■□□□ 1.57
CHRNA1P02708 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHRNA1P02708 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CHRNA1P02708 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHRNA1P02708 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
CHRNA1P02708 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHRNA1P02708 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHRNA1P02708 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CHRNA1P02708 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHRNA1P02708 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
CHRNA1P02708 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHRNA1P02708 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHRNA1P02708 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms