Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PGK1P00558 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.48■■□□□ 1.67
PGK1P00558 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PGK1P00558 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PGK1P00558 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.48■■□□□ 1.67
PGK1P00558 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PGK1P00558 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.48■■□□□ 1.67
PGK1P00558 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PGK1P00558 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PGK1P00558 TSPY26P-201ENST00000476365 1326 ntBASIC25.47■■□□□ 1.67
PGK1P00558 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PGK1P00558 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
PGK1P00558 YBX1P1-201ENST00000445822 960 ntBASIC25.47■■□□□ 1.67
PGK1P00558 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.47■■□□□ 1.67
PGK1P00558 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.47■■□□□ 1.67
PGK1P00558 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.47■■□□□ 1.67
PGK1P00558 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PGK1P00558 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.47■■□□□ 1.67
PGK1P00558 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PGK1P00558 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PGK1P00558 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PGK1P00558 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PGK1P00558 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PGK1P00558 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PGK1P00558 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PGK1P00558 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.46■■□□□ 1.67
PGK1P00558 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PGK1P00558 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.46■■□□□ 1.67
PGK1P00558 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.46■■□□□ 1.67
PGK1P00558 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.45■■□□□ 1.67
PGK1P00558 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PGK1P00558 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.45■■□□□ 1.66
PGK1P00558 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.45■■□□□ 1.66
PGK1P00558 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
PGK1P00558 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.45■■□□□ 1.66
PGK1P00558 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.45■■□□□ 1.66
PGK1P00558 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PGK1P00558 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PGK1P00558 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.44■■□□□ 1.66
PGK1P00558 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PGK1P00558 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.44■■□□□ 1.66
PGK1P00558 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.44■■□□□ 1.66
PGK1P00558 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.44■■□□□ 1.66
PGK1P00558 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
PGK1P00558 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PGK1P00558 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PGK1P00558 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.44■■□□□ 1.66
PGK1P00558 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L2-201ENST00000561772 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 AL137784.2-201ENST00000607332 1000 ntBASIC25.44■■□□□ 1.66
PGK1P00558 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.44■■□□□ 1.66
PGK1P00558 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L6-201ENST00000626483 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L1-201ENST00000627662 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L8-201ENST00000629013 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L3-201ENST00000630187 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L7-201ENST00000630678 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 DUX4L5-201ENST00000630834 1275 ntBASIC25.44■■□□□ 1.66
PGK1P00558 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PGK1P00558 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PGK1P00558 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PGK1P00558 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PGK1P00558 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PGK1P00558 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PGK1P00558 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PGK1P00558 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PGK1P00558 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PGK1P00558 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PGK1P00558 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.43■■□□□ 1.66
PGK1P00558 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.43■■□□□ 1.66
PGK1P00558 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.43■■□□□ 1.66
PGK1P00558 SLC47A1P1-202ENST00000449666 945 ntBASIC25.43■■□□□ 1.66
PGK1P00558 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PGK1P00558 AC092437.1-201ENST00000624794 1048 ntBASIC25.43■■□□□ 1.66
PGK1P00558 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.43■■□□□ 1.66
PGK1P00558 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PGK1P00558 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PGK1P00558 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PGK1P00558 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PGK1P00558 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.42■■□□□ 1.66
PGK1P00558 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PGK1P00558 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PGK1P00558 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.41■■□□□ 1.66
PGK1P00558 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PGK1P00558 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PGK1P00558 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
PGK1P00558 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PGK1P00558 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PGK1P00558 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.4■■□□□ 1.66
PGK1P00558 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.4■■□□□ 1.66
PGK1P00558 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PGK1P00558 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PGK1P00558 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PGK1P00558 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PGK1P00558 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.4■■□□□ 1.66
PGK1P00558 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.4■■□□□ 1.66
PGK1P00558 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.4■■□□□ 1.66
PGK1P00558 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PGK1P00558 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.4■■□□□ 1.66
PGK1P00558 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms