Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL3O95164 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.24■□□□□ 0.83
UBL3O95164 AC009299.2-201ENST00000482477 511 ntBASIC20.24■□□□□ 0.83
UBL3O95164 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBL3O95164 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL3O95164 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.24■□□□□ 0.83
UBL3O95164 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL3O95164 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.24■□□□□ 0.83
UBL3O95164 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBL3O95164 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBL3O95164 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.23■□□□□ 0.83
UBL3O95164 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBL3O95164 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
UBL3O95164 Z92544.1-202ENST00000571933 1220 ntBASIC20.23■□□□□ 0.83
UBL3O95164 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBL3O95164 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL3O95164 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 AF131216.4-201ENST00000638924 1588 ntBASIC20.22■□□□□ 0.83
UBL3O95164 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL3O95164 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL3O95164 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL3O95164 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBL3O95164 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBL3O95164 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
UBL3O95164 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.22■□□□□ 0.83
UBL3O95164 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
UBL3O95164 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.21■□□□□ 0.83
UBL3O95164 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.21■□□□□ 0.83
UBL3O95164 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.21■□□□□ 0.83
UBL3O95164 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.21■□□□□ 0.83
UBL3O95164 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.21■□□□□ 0.83
UBL3O95164 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBL3O95164 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UBL3O95164 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
UBL3O95164 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBL3O95164 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.2■□□□□ 0.82
UBL3O95164 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.2■□□□□ 0.82
UBL3O95164 KRT125P-201ENST00000546827 989 ntBASIC20.2■□□□□ 0.82
UBL3O95164 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL3O95164 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBL3O95164 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBL3O95164 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.2■□□□□ 0.82
UBL3O95164 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
UBL3O95164 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBL3O95164 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.19■□□□□ 0.82
UBL3O95164 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL3O95164 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL3O95164 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL3O95164 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
UBL3O95164 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBL3O95164 AL161729.1-201ENST00000604104 1402 ntBASIC20.19■□□□□ 0.82
UBL3O95164 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
UBL3O95164 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.18■□□□□ 0.82
UBL3O95164 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
UBL3O95164 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
UBL3O95164 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.18■□□□□ 0.82
UBL3O95164 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.18■□□□□ 0.82
UBL3O95164 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.18■□□□□ 0.82
UBL3O95164 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
UBL3O95164 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBL3O95164 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBL3O95164 AL022069.1-201ENST00000568025 1636 ntBASIC20.17■□□□□ 0.82
UBL3O95164 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL3O95164 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBL3O95164 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UBL3O95164 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBL3O95164 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.17■□□□□ 0.82
UBL3O95164 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBL3O95164 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.17■□□□□ 0.82
UBL3O95164 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.17■□□□□ 0.82
UBL3O95164 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.17■□□□□ 0.82
UBL3O95164 AL035685.1-201ENST00000636663 812 ntBASIC20.17■□□□□ 0.82
UBL3O95164 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL3O95164 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL3O95164 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBL3O95164 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBL3O95164 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.16■□□□□ 0.82
UBL3O95164 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms