Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDKL5O76039 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CDKL5O76039 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDKL5O76039 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CDKL5O76039 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDKL5O76039 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDKL5O76039 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDKL5O76039 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.38■■□□□ 1.81
CDKL5O76039 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDKL5O76039 ANOS2P-203ENST00000472227 1816 ntBASIC26.38■■□□□ 1.81
CDKL5O76039 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CDKL5O76039 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
CDKL5O76039 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDKL5O76039 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
CDKL5O76039 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.37■■□□□ 1.81
CDKL5O76039 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDKL5O76039 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.37■■□□□ 1.81
CDKL5O76039 MIR4787-201ENST00000607364 84 ntBASIC26.37■■□□□ 1.81
CDKL5O76039 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.37■■□□□ 1.81
CDKL5O76039 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDKL5O76039 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CDKL5O76039 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.37■■□□□ 1.81
CDKL5O76039 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDKL5O76039 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CDKL5O76039 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.36■■□□□ 1.81
CDKL5O76039 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CDKL5O76039 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.36■■□□□ 1.81
CDKL5O76039 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.36■■□□□ 1.81
CDKL5O76039 AC239859.2-201ENST00000444165 318 ntBASIC26.36■■□□□ 1.81
CDKL5O76039 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.36■■□□□ 1.81
CDKL5O76039 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CDKL5O76039 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDKL5O76039 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDKL5O76039 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.36■■□□□ 1.81
CDKL5O76039 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDKL5O76039 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDKL5O76039 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDKL5O76039 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CDKL5O76039 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.35■■□□□ 1.81
CDKL5O76039 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDKL5O76039 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.35■■□□□ 1.81
CDKL5O76039 AC092068.2-201ENST00000590491 1708 ntBASIC26.35■■□□□ 1.81
CDKL5O76039 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDKL5O76039 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDKL5O76039 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
CDKL5O76039 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDKL5O76039 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDKL5O76039 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDKL5O76039 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.34■■□□□ 1.81
CDKL5O76039 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.34■■□□□ 1.81
CDKL5O76039 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CDKL5O76039 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDKL5O76039 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDKL5O76039 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDKL5O76039 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CDKL5O76039 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDKL5O76039 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDKL5O76039 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
CDKL5O76039 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDKL5O76039 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.33■■□□□ 1.81
CDKL5O76039 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDKL5O76039 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.33■■□□□ 1.81
CDKL5O76039 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDKL5O76039 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.33■■□□□ 1.81
CDKL5O76039 AC005703.6-201ENST00000623265 1329 ntBASIC26.33■■□□□ 1.81
CDKL5O76039 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDKL5O76039 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CDKL5O76039 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDKL5O76039 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.32■■□□□ 1.8
CDKL5O76039 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDKL5O76039 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDKL5O76039 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDKL5O76039 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CDKL5O76039 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDKL5O76039 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDKL5O76039 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDKL5O76039 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.31■■□□□ 1.8
CDKL5O76039 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDKL5O76039 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.31■■□□□ 1.8
CDKL5O76039 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.31■■□□□ 1.8
CDKL5O76039 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CDKL5O76039 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDKL5O76039 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDKL5O76039 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDKL5O76039 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CDKL5O76039 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.3■■□□□ 1.8
CDKL5O76039 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
CDKL5O76039 MTDHP2-201ENST00000601468 714 ntBASIC26.3■■□□□ 1.8
CDKL5O76039 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
CDKL5O76039 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.3■■□□□ 1.8
CDKL5O76039 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDKL5O76039 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms