Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLPXO76031 HLA-L-211ENST00000482052 1765 ntBASIC20.49■□□□□ 0.87
CLPXO76031 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPXO76031 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.49■□□□□ 0.87
CLPXO76031 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPXO76031 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.49■□□□□ 0.87
CLPXO76031 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPXO76031 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLPXO76031 AC092068.2-201ENST00000590491 1708 ntBASIC20.49■□□□□ 0.87
CLPXO76031 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLPXO76031 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLPXO76031 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
CLPXO76031 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CLPXO76031 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.48■□□□□ 0.87
CLPXO76031 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.48■□□□□ 0.87
CLPXO76031 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPXO76031 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CLPXO76031 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPXO76031 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPXO76031 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPXO76031 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLPXO76031 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPXO76031 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.46■□□□□ 0.87
CLPXO76031 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CLPXO76031 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLPXO76031 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.46■□□□□ 0.87
CLPXO76031 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPXO76031 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPXO76031 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPXO76031 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPXO76031 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLPXO76031 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CLPXO76031 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.45■□□□□ 0.86
CLPXO76031 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLPXO76031 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPXO76031 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLPXO76031 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPXO76031 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLPXO76031 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPXO76031 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPXO76031 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPXO76031 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLPXO76031 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.44■□□□□ 0.86
CLPXO76031 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CLPXO76031 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPXO76031 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CLPXO76031 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLPXO76031 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CLPXO76031 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.43■□□□□ 0.86
CLPXO76031 AC092667.1-201ENST00000434301 2586 ntBASIC20.43■□□□□ 0.86
CLPXO76031 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPXO76031 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPXO76031 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.43■□□□□ 0.86
CLPXO76031 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
CLPXO76031 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPXO76031 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CLPXO76031 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms