Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
SUPT3HO75486 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SUPT3HO75486 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.36■■□□□ 1.17
SUPT3HO75486 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SUPT3HO75486 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SUPT3HO75486 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
SUPT3HO75486 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SUPT3HO75486 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SUPT3HO75486 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.36■■□□□ 1.17
SUPT3HO75486 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SUPT3HO75486 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.35■■□□□ 1.17
SUPT3HO75486 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.35■■□□□ 1.17
SUPT3HO75486 AL033527.3-201ENST00000566366 1196 ntBASIC22.35■■□□□ 1.17
SUPT3HO75486 MIR4281-201ENST00000580852 62 ntBASIC22.35■■□□□ 1.17
SUPT3HO75486 ANOS2P-203ENST00000472227 1816 ntBASIC22.35■■□□□ 1.17
SUPT3HO75486 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SUPT3HO75486 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SUPT3HO75486 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.34■■□□□ 1.17
SUPT3HO75486 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SUPT3HO75486 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SUPT3HO75486 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SUPT3HO75486 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.34■■□□□ 1.17
SUPT3HO75486 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SUPT3HO75486 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SUPT3HO75486 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
SUPT3HO75486 C9orf163-202ENST00000624034 2573 ntBASIC22.34■■□□□ 1.17
SUPT3HO75486 AC079834.2-201ENST00000609776 1949 ntBASIC22.33■■□□□ 1.17
SUPT3HO75486 ALDH1A3-203ENST00000557963 1670 ntBASIC22.33■■□□□ 1.17
SUPT3HO75486 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SUPT3HO75486 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
SUPT3HO75486 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SUPT3HO75486 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.33■■□□□ 1.17
SUPT3HO75486 KRT18P24-201ENST00000344739 1156 ntBASIC22.33■■□□□ 1.17
SUPT3HO75486 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.33■■□□□ 1.17
SUPT3HO75486 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.33■■□□□ 1.17
SUPT3HO75486 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.33■■□□□ 1.17
SUPT3HO75486 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.33■■□□□ 1.17
SUPT3HO75486 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SUPT3HO75486 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SUPT3HO75486 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SUPT3HO75486 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SUPT3HO75486 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
SUPT3HO75486 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.33■■□□□ 1.16
SUPT3HO75486 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SUPT3HO75486 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.32■■□□□ 1.16
SUPT3HO75486 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SUPT3HO75486 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SUPT3HO75486 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SUPT3HO75486 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.31■■□□□ 1.16
SUPT3HO75486 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.31■■□□□ 1.16
SUPT3HO75486 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.31■■□□□ 1.16
SUPT3HO75486 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.31■■□□□ 1.16
SUPT3HO75486 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
SUPT3HO75486 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.31■■□□□ 1.16
SUPT3HO75486 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SUPT3HO75486 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SUPT3HO75486 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.3■■□□□ 1.16
SUPT3HO75486 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.3■■□□□ 1.16
SUPT3HO75486 AF131216.4-201ENST00000638924 1588 ntBASIC22.3■■□□□ 1.16
SUPT3HO75486 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SUPT3HO75486 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SUPT3HO75486 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SUPT3HO75486 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.3■■□□□ 1.16
SUPT3HO75486 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SUPT3HO75486 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SUPT3HO75486 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
SUPT3HO75486 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.29■■□□□ 1.16
SUPT3HO75486 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SUPT3HO75486 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.28■■□□□ 1.16
SUPT3HO75486 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.28■■□□□ 1.16
SUPT3HO75486 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.28■■□□□ 1.16
SUPT3HO75486 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SUPT3HO75486 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.28■■□□□ 1.16
SUPT3HO75486 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SUPT3HO75486 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.27■■□□□ 1.16
SUPT3HO75486 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SUPT3HO75486 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SUPT3HO75486 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
SUPT3HO75486 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms