Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.17■■□□□ 1.14
VPS4BO75351 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VPS4BO75351 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.17■■□□□ 1.14
VPS4BO75351 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VPS4BO75351 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.17■■□□□ 1.14
VPS4BO75351 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS4BO75351 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VPS4BO75351 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.16■■□□□ 1.14
VPS4BO75351 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS4BO75351 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS4BO75351 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS4BO75351 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS4BO75351 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS4BO75351 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.15■■□□□ 1.14
VPS4BO75351 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
VPS4BO75351 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.15■■□□□ 1.14
VPS4BO75351 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
VPS4BO75351 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS4BO75351 ANOS2P-203ENST00000472227 1816 ntBASIC22.15■■□□□ 1.14
VPS4BO75351 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VPS4BO75351 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
VPS4BO75351 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS4BO75351 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS4BO75351 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
VPS4BO75351 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS4BO75351 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.14■■□□□ 1.13
VPS4BO75351 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
VPS4BO75351 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VPS4BO75351 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS4BO75351 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.14■■□□□ 1.13
VPS4BO75351 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VPS4BO75351 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
VPS4BO75351 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS4BO75351 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VPS4BO75351 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS4BO75351 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.13■■□□□ 1.13
VPS4BO75351 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS4BO75351 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS4BO75351 AC092068.2-201ENST00000590491 1708 ntBASIC22.12■■□□□ 1.13
VPS4BO75351 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS4BO75351 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS4BO75351 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.12■■□□□ 1.13
VPS4BO75351 AC087393.1-201ENST00000582896 145 ntBASIC22.12■■□□□ 1.13
VPS4BO75351 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.12■■□□□ 1.13
VPS4BO75351 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS4BO75351 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.11■■□□□ 1.13
VPS4BO75351 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.11■■□□□ 1.13
VPS4BO75351 C9orf163-202ENST00000624034 2573 ntBASIC22.11■■□□□ 1.13
VPS4BO75351 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
VPS4BO75351 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.11■■□□□ 1.13
VPS4BO75351 BX664725.1-201ENST00000438252 379 ntBASIC22.11■■□□□ 1.13
VPS4BO75351 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
VPS4BO75351 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.11■■□□□ 1.13
VPS4BO75351 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.11■■□□□ 1.13
VPS4BO75351 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS4BO75351 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS4BO75351 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
VPS4BO75351 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS4BO75351 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS4BO75351 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS4BO75351 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS4BO75351 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VPS4BO75351 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
VPS4BO75351 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.1■■□□□ 1.13
VPS4BO75351 MIR4787-201ENST00000607364 84 ntBASIC22.1■■□□□ 1.13
VPS4BO75351 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS4BO75351 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS4BO75351 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS4BO75351 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VPS4BO75351 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VPS4BO75351 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.09■■□□□ 1.13
VPS4BO75351 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.09■■□□□ 1.13
VPS4BO75351 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS4BO75351 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS4BO75351 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms