Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
BRD4O60885 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
BRD4O60885 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
BRD4O60885 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BRD4O60885 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BRD4O60885 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BRD4O60885 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.57■■■□□ 2.64
BRD4O60885 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
BRD4O60885 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.56■■■□□ 2.64
BRD4O60885 AC105265.2-201ENST00000467189 838 ntBASIC31.56■■■□□ 2.64
BRD4O60885 AC091305.1-201ENST00000479476 895 ntBASIC31.56■■■□□ 2.64
BRD4O60885 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.56■■■□□ 2.64
BRD4O60885 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
BRD4O60885 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.56■■■□□ 2.64
BRD4O60885 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
BRD4O60885 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.56■■■□□ 2.64
BRD4O60885 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
BRD4O60885 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
BRD4O60885 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
BRD4O60885 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
BRD4O60885 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
BRD4O60885 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.55■■■□□ 2.64
BRD4O60885 AC141586.4-201ENST00000624558 1573 ntBASIC31.55■■■□□ 2.64
BRD4O60885 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.55■■■□□ 2.64
BRD4O60885 AL138724.1-201ENST00000606771 1088 ntBASIC31.55■■■□□ 2.64
BRD4O60885 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
BRD4O60885 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.54■■■□□ 2.64
BRD4O60885 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BRD4O60885 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
BRD4O60885 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BRD4O60885 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
BRD4O60885 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.54■■■□□ 2.64
BRD4O60885 HLA-L-211ENST00000482052 1765 ntBASIC31.53■■■□□ 2.64
BRD4O60885 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BRD4O60885 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.53■■■□□ 2.64
BRD4O60885 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BRD4O60885 AC011298.3-201ENST00000615796 283 ntBASIC31.53■■■□□ 2.64
BRD4O60885 SYT6-210ENST00000641643 1587 ntBASIC31.53■■■□□ 2.64
BRD4O60885 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
BRD4O60885 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BRD4O60885 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BRD4O60885 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
BRD4O60885 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.52■■■□□ 2.64
BRD4O60885 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.52■■■□□ 2.64
BRD4O60885 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.52■■■□□ 2.64
BRD4O60885 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.52■■■□□ 2.64
BRD4O60885 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BRD4O60885 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BRD4O60885 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
BRD4O60885 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
BRD4O60885 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
BRD4O60885 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
BRD4O60885 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
BRD4O60885 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
BRD4O60885 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
BRD4O60885 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
BRD4O60885 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.5■■■□□ 2.63
BRD4O60885 MIR5787-201ENST00000611784 55 ntBASIC31.5■■■□□ 2.63
BRD4O60885 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
BRD4O60885 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.49■■■□□ 2.63
BRD4O60885 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
BRD4O60885 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
BRD4O60885 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.49■■■□□ 2.63
BRD4O60885 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
BRD4O60885 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.49■■■□□ 2.63
BRD4O60885 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BRD4O60885 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BRD4O60885 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
BRD4O60885 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.48■■■□□ 2.63
BRD4O60885 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.48■■■□□ 2.63
BRD4O60885 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
BRD4O60885 MIR4767-201ENST00000582827 78 ntBASIC31.48■■■□□ 2.63
BRD4O60885 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
BRD4O60885 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRD4O60885 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.47■■■□□ 2.63
BRD4O60885 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRD4O60885 SERBP1P1-201ENST00000396021 1160 ntBASIC31.47■■■□□ 2.63
BRD4O60885 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRD4O60885 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.47■■■□□ 2.63
BRD4O60885 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRD4O60885 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
BRD4O60885 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
BRD4O60885 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
BRD4O60885 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
BRD4O60885 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
BRD4O60885 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
BRD4O60885 RASA4CP-201ENST00000424092 1398 ntBASIC31.45■■■□□ 2.63
BRD4O60885 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
BRD4O60885 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.45■■■□□ 2.63
BRD4O60885 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.44■■■□□ 2.62
BRD4O60885 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
BRD4O60885 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.44■■■□□ 2.62
BRD4O60885 AC027682.1-201ENST00000562846 899 ntBASIC31.44■■■□□ 2.62
BRD4O60885 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.43■■■□□ 2.62
BRD4O60885 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.43■■■□□ 2.62
BRD4O60885 MIR6821-201ENST00000617625 74 ntBASIC31.43■■■□□ 2.62
BRD4O60885 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
BRD4O60885 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
BRD4O60885 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
BRD4O60885 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms