Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
MMP20O60882 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP20O60882 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP20O60882 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
MMP20O60882 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.65■■□□□ 1.22
MMP20O60882 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.65■■□□□ 1.22
MMP20O60882 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP20O60882 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
MMP20O60882 AL139125.2-201ENST00000623134 1869 ntBASIC22.64■■□□□ 1.22
MMP20O60882 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MMP20O60882 PBX2P1-201ENST00000493219 1291 ntBASIC22.64■■□□□ 1.21
MMP20O60882 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP20O60882 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP20O60882 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
MMP20O60882 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.63■■□□□ 1.21
MMP20O60882 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
MMP20O60882 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP20O60882 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.63■■□□□ 1.21
MMP20O60882 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP20O60882 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP20O60882 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MMP20O60882 AC099791.2-201ENST00000605725 427 ntBASIC22.63■■□□□ 1.21
MMP20O60882 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
MMP20O60882 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP20O60882 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP20O60882 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MMP20O60882 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
MMP20O60882 C17orf82-201ENST00000623772 1530 ntBASIC22.62■■□□□ 1.21
MMP20O60882 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP20O60882 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP20O60882 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP20O60882 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
MMP20O60882 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.62■■□□□ 1.21
MMP20O60882 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
MMP20O60882 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP20O60882 AL136162.1-201ENST00000607711 1078 ntBASIC22.62■■□□□ 1.21
MMP20O60882 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.62■■□□□ 1.21
MMP20O60882 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP20O60882 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
MMP20O60882 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP20O60882 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MMP20O60882 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
MMP20O60882 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP20O60882 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MMP20O60882 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MMP20O60882 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.6■■□□□ 1.21
MMP20O60882 LINC00543-201ENST00000567234 1845 ntBASIC22.6■■□□□ 1.21
MMP20O60882 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP20O60882 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.6■■□□□ 1.21
MMP20O60882 AC106739.1-201ENST00000617035 715 ntBASIC22.6■■□□□ 1.21
MMP20O60882 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.6■■□□□ 1.21
MMP20O60882 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP20O60882 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP20O60882 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MMP20O60882 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
MMP20O60882 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP20O60882 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.6■■□□□ 1.21
MMP20O60882 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MMP20O60882 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
MMP20O60882 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.59■■□□□ 1.21
MMP20O60882 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MMP20O60882 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.59■■□□□ 1.21
MMP20O60882 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP20O60882 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP20O60882 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
MMP20O60882 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
MMP20O60882 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP20O60882 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.59■■□□□ 1.21
MMP20O60882 AC005837.3-201ENST00000612163 286 ntBASIC22.59■■□□□ 1.21
MMP20O60882 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MMP20O60882 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP20O60882 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP20O60882 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.58■■□□□ 1.21
MMP20O60882 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
MMP20O60882 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MMP20O60882 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
MMP20O60882 AC141586.4-201ENST00000624558 1573 ntBASIC22.58■■□□□ 1.2
MMP20O60882 SYT6-210ENST00000641643 1587 ntBASIC22.58■■□□□ 1.2
MMP20O60882 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MMP20O60882 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MMP20O60882 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
MMP20O60882 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP20O60882 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP20O60882 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.57■■□□□ 1.2
MMP20O60882 AC024257.2-201ENST00000549699 147 ntBASIC22.57■■□□□ 1.2
MMP20O60882 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
MMP20O60882 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.57■■□□□ 1.2
MMP20O60882 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP20O60882 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP20O60882 AC135279.3-201ENST00000610945 1311 ntBASIC22.57■■□□□ 1.2
MMP20O60882 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP20O60882 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP20O60882 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms