Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF11O60813 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF11O60813 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF11O60813 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF11O60813 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF11O60813 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF11O60813 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF11O60813 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF11O60813 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF11O60813 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.11■■□□□ 1.29
PRAMEF11O60813 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF11O60813 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF11O60813 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF11O60813 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF11O60813 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF11O60813 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF11O60813 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
PRAMEF11O60813 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PRAMEF11O60813 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRAMEF11O60813 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.09■■□□□ 1.29
PRAMEF11O60813 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRAMEF11O60813 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.09■■□□□ 1.29
PRAMEF11O60813 AC131212.1-201ENST00000613771 668 ntBASIC23.09■■□□□ 1.29
PRAMEF11O60813 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.09■■□□□ 1.29
PRAMEF11O60813 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PRAMEF11O60813 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PRAMEF11O60813 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRAMEF11O60813 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PRAMEF11O60813 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
PRAMEF11O60813 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF11O60813 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF11O60813 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
PRAMEF11O60813 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PRAMEF11O60813 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF11O60813 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.07■■□□□ 1.28
PRAMEF11O60813 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF11O60813 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF11O60813 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF11O60813 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF11O60813 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
PRAMEF11O60813 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.07■■□□□ 1.28
PRAMEF11O60813 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF11O60813 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.06■■□□□ 1.28
PRAMEF11O60813 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PRAMEF11O60813 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PRAMEF11O60813 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRAMEF11O60813 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRAMEF11O60813 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRAMEF11O60813 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRAMEF11O60813 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PRAMEF11O60813 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.05■■□□□ 1.28
PRAMEF11O60813 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRAMEF11O60813 AC009102.2-201ENST00000606772 1639 ntBASIC23.04■■□□□ 1.28
PRAMEF11O60813 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
PRAMEF11O60813 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.04■■□□□ 1.28
PRAMEF11O60813 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.04■■□□□ 1.28
PRAMEF11O60813 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.04■■□□□ 1.28
PRAMEF11O60813 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRAMEF11O60813 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRAMEF11O60813 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.04■■□□□ 1.28
PRAMEF11O60813 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRAMEF11O60813 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PRAMEF11O60813 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PRAMEF11O60813 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 AL512631.2-201ENST00000604634 923 ntBASIC23.03■■□□□ 1.28
PRAMEF11O60813 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PRAMEF11O60813 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PRAMEF11O60813 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRAMEF11O60813 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRAMEF11O60813 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRAMEF11O60813 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRAMEF11O60813 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRAMEF11O60813 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRAMEF11O60813 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms