Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CTNND1O60716 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CTNND1O60716 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CTNND1O60716 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CTNND1O60716 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.73■■□□□ 1.87
CTNND1O60716 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.73■■□□□ 1.87
CTNND1O60716 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.73■■□□□ 1.87
CTNND1O60716 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.73■■□□□ 1.87
CTNND1O60716 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.73■■□□□ 1.87
CTNND1O60716 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CTNND1O60716 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.73■■□□□ 1.87
CTNND1O60716 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.72■■□□□ 1.87
CTNND1O60716 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.72■■□□□ 1.87
CTNND1O60716 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.72■■□□□ 1.87
CTNND1O60716 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.72■■□□□ 1.87
CTNND1O60716 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CTNND1O60716 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CTNND1O60716 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.71■■□□□ 1.87
CTNND1O60716 JTB-203ENST00000368589 1216 ntTSL 2 BASIC26.71■■□□□ 1.87
CTNND1O60716 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CTNND1O60716 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CTNND1O60716 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CTNND1O60716 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.71■■□□□ 1.87
CTNND1O60716 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CTNND1O60716 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CTNND1O60716 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CTNND1O60716 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
CTNND1O60716 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CTNND1O60716 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CTNND1O60716 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.69■■□□□ 1.86
CTNND1O60716 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CTNND1O60716 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.69■■□□□ 1.86
CTNND1O60716 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.69■■□□□ 1.86
CTNND1O60716 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CTNND1O60716 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CTNND1O60716 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CTNND1O60716 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CTNND1O60716 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.68■■□□□ 1.86
CTNND1O60716 AL162430.1-201ENST00000480705 870 ntBASIC26.68■■□□□ 1.86
CTNND1O60716 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CTNND1O60716 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CTNND1O60716 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CTNND1O60716 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
CTNND1O60716 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTNND1O60716 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CTNND1O60716 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.67■■□□□ 1.86
CTNND1O60716 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CTNND1O60716 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTNND1O60716 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CTNND1O60716 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTNND1O60716 ALDH1A3-203ENST00000557963 1670 ntBASIC26.66■■□□□ 1.86
CTNND1O60716 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTNND1O60716 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CTNND1O60716 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CTNND1O60716 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.66■■□□□ 1.86
CTNND1O60716 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.65■■□□□ 1.86
CTNND1O60716 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTNND1O60716 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.65■■□□□ 1.86
CTNND1O60716 pRNA.6-201ENST00000610482 90 ntBASIC26.65■■□□□ 1.86
CTNND1O60716 pRNA.5-201ENST00000612139 90 ntBASIC26.65■■□□□ 1.86
CTNND1O60716 pRNA.11-201ENST00000618423 90 ntBASIC26.65■■□□□ 1.86
CTNND1O60716 pRNA.13-201ENST00000619112 90 ntBASIC26.65■■□□□ 1.86
CTNND1O60716 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CTNND1O60716 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.64■■□□□ 1.86
CTNND1O60716 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.64■■□□□ 1.86
CTNND1O60716 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.64■■□□□ 1.86
CTNND1O60716 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.64■■□□□ 1.86
CTNND1O60716 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CTNND1O60716 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CTNND1O60716 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
CTNND1O60716 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTNND1O60716 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CTNND1O60716 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.63■■□□□ 1.85
CTNND1O60716 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.63■■□□□ 1.85
CTNND1O60716 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.63■■□□□ 1.85
CTNND1O60716 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTNND1O60716 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
CTNND1O60716 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CTNND1O60716 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
CTNND1O60716 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.62■■□□□ 1.85
CTNND1O60716 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTNND1O60716 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTNND1O60716 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTNND1O60716 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTNND1O60716 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTNND1O60716 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.61■■□□□ 1.85
CTNND1O60716 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.61■■□□□ 1.85
CTNND1O60716 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.61■■□□□ 1.85
CTNND1O60716 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTNND1O60716 AC141586.4-201ENST00000624558 1573 ntBASIC26.61■■□□□ 1.85
CTNND1O60716 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTNND1O60716 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.6■■□□□ 1.85
CTNND1O60716 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTNND1O60716 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.6■■□□□ 1.85
CTNND1O60716 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTNND1O60716 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.6■■□□□ 1.85
CTNND1O60716 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CTNND1O60716 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CTNND1O60716 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.6■■□□□ 1.85
CTNND1O60716 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms