Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.41■■□□□ 1.34
TSPAN3O60637 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.41■■□□□ 1.34
TSPAN3O60637 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TSPAN3O60637 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TSPAN3O60637 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TSPAN3O60637 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TSPAN3O60637 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TSPAN3O60637 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.4■■□□□ 1.34
TSPAN3O60637 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TSPAN3O60637 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TSPAN3O60637 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
TSPAN3O60637 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TSPAN3O60637 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TSPAN3O60637 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
TSPAN3O60637 UNC93B3-201ENST00000308076 687 ntBASIC23.39■■□□□ 1.33
TSPAN3O60637 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TSPAN3O60637 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TSPAN3O60637 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TSPAN3O60637 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TSPAN3O60637 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TSPAN3O60637 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TSPAN3O60637 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
TSPAN3O60637 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TSPAN3O60637 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.38■■□□□ 1.33
TSPAN3O60637 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
TSPAN3O60637 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TSPAN3O60637 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TSPAN3O60637 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.37■■□□□ 1.33
TSPAN3O60637 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.37■■□□□ 1.33
TSPAN3O60637 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.37■■□□□ 1.33
TSPAN3O60637 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TSPAN3O60637 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
TSPAN3O60637 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TSPAN3O60637 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TSPAN3O60637 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TSPAN3O60637 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TSPAN3O60637 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TSPAN3O60637 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TSPAN3O60637 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.36■■□□□ 1.33
TSPAN3O60637 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TSPAN3O60637 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TSPAN3O60637 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.36■■□□□ 1.33
TSPAN3O60637 LINC00543-201ENST00000567234 1845 ntBASIC23.36■■□□□ 1.33
TSPAN3O60637 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TSPAN3O60637 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.35■■□□□ 1.33
TSPAN3O60637 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TSPAN3O60637 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.35■■□□□ 1.33
TSPAN3O60637 PBX2P1-201ENST00000493219 1291 ntBASIC23.35■■□□□ 1.33
TSPAN3O60637 AC099791.2-201ENST00000605725 427 ntBASIC23.35■■□□□ 1.33
TSPAN3O60637 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.35■■□□□ 1.33
TSPAN3O60637 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.35■■□□□ 1.33
TSPAN3O60637 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TSPAN3O60637 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
TSPAN3O60637 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TSPAN3O60637 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.34■■□□□ 1.33
TSPAN3O60637 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.34■■□□□ 1.33
TSPAN3O60637 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TSPAN3O60637 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TSPAN3O60637 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TSPAN3O60637 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.34■■□□□ 1.33
TSPAN3O60637 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TSPAN3O60637 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.34■■□□□ 1.33
TSPAN3O60637 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TSPAN3O60637 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TSPAN3O60637 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TSPAN3O60637 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TSPAN3O60637 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TSPAN3O60637 AL136162.1-201ENST00000607711 1078 ntBASIC23.33■■□□□ 1.33
TSPAN3O60637 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TSPAN3O60637 C17orf82-201ENST00000623772 1530 ntBASIC23.33■■□□□ 1.32
TSPAN3O60637 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
TSPAN3O60637 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TSPAN3O60637 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TSPAN3O60637 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TSPAN3O60637 AC004812.2-201ENST00000611079 2094 ntBASIC23.32■■□□□ 1.32
TSPAN3O60637 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.32■■□□□ 1.32
TSPAN3O60637 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TSPAN3O60637 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TSPAN3O60637 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TSPAN3O60637 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TSPAN3O60637 AC141586.4-201ENST00000624558 1573 ntBASIC23.31■■□□□ 1.32
TSPAN3O60637 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TSPAN3O60637 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.31■■□□□ 1.32
TSPAN3O60637 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.31■■□□□ 1.32
TSPAN3O60637 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.31■■□□□ 1.32
TSPAN3O60637 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TSPAN3O60637 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TSPAN3O60637 MIR935-201ENST00000401179 91 ntBASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms