Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SMAD9O15198 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD9O15198 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD9O15198 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.47■□□□□ 0.87
SMAD9O15198 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.47■□□□□ 0.87
SMAD9O15198 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD9O15198 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
SMAD9O15198 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.46■□□□□ 0.87
SMAD9O15198 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.46■□□□□ 0.87
SMAD9O15198 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.46■□□□□ 0.87
SMAD9O15198 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD9O15198 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMAD9O15198 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD9O15198 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SMAD9O15198 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.45■□□□□ 0.86
SMAD9O15198 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.45■□□□□ 0.86
SMAD9O15198 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD9O15198 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SMAD9O15198 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
SMAD9O15198 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.44■□□□□ 0.86
SMAD9O15198 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.44■□□□□ 0.86
SMAD9O15198 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD9O15198 AC004812.2-201ENST00000611079 2094 ntBASIC20.44■□□□□ 0.86
SMAD9O15198 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD9O15198 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMAD9O15198 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMAD9O15198 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMAD9O15198 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMAD9O15198 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.43■□□□□ 0.86
SMAD9O15198 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.43■□□□□ 0.86
SMAD9O15198 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SMAD9O15198 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD9O15198 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD9O15198 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD9O15198 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SMAD9O15198 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD9O15198 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.42■□□□□ 0.86
SMAD9O15198 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SMAD9O15198 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.42■□□□□ 0.86
SMAD9O15198 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.42■□□□□ 0.86
SMAD9O15198 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMAD9O15198 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SMAD9O15198 ALDH1A3-203ENST00000557963 1670 ntBASIC20.42■□□□□ 0.86
SMAD9O15198 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.41■□□□□ 0.86
SMAD9O15198 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMAD9O15198 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.41■□□□□ 0.86
SMAD9O15198 MIR6724-1-201ENST00000616420 92 ntBASIC20.41■□□□□ 0.86
SMAD9O15198 MIR6724-2-201ENST00000616483 92 ntBASIC20.41■□□□□ 0.86
SMAD9O15198 MIR6724-4-201ENST00000617390 92 ntBASIC20.41■□□□□ 0.86
SMAD9O15198 MIR6724-3-201ENST00000622482 92 ntBASIC20.41■□□□□ 0.86
SMAD9O15198 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.41■□□□□ 0.86
SMAD9O15198 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.41■□□□□ 0.86
SMAD9O15198 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMAD9O15198 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD9O15198 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD9O15198 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD9O15198 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.4■□□□□ 0.86
SMAD9O15198 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.4■□□□□ 0.86
SMAD9O15198 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD9O15198 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.4■□□□□ 0.86
SMAD9O15198 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
SMAD9O15198 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMAD9O15198 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMAD9O15198 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMAD9O15198 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SMAD9O15198 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMAD9O15198 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms