Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 ALDH1A3-203ENST00000557963 1670 ntBASIC21.96■■□□□ 1.11
SDHDO14521 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.96■■□□□ 1.11
SDHDO14521 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.96■■□□□ 1.11
SDHDO14521 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SDHDO14521 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.95■■□□□ 1.1
SDHDO14521 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.95■■□□□ 1.1
SDHDO14521 LONRF2P2-201ENST00000439212 571 ntBASIC21.95■■□□□ 1.1
SDHDO14521 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.95■■□□□ 1.1
SDHDO14521 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SDHDO14521 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SDHDO14521 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SDHDO14521 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SDHDO14521 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.94■■□□□ 1.1
SDHDO14521 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.94■■□□□ 1.1
SDHDO14521 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SDHDO14521 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.94■■□□□ 1.1
SDHDO14521 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.94■■□□□ 1.1
SDHDO14521 ECEL1P1-201ENST00000373592 1742 ntBASIC21.94■■□□□ 1.1
SDHDO14521 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SDHDO14521 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHDO14521 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHDO14521 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHDO14521 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHDO14521 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDHDO14521 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.93■■□□□ 1.1
SDHDO14521 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.93■■□□□ 1.1
SDHDO14521 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.93■■□□□ 1.1
SDHDO14521 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.93■■□□□ 1.1
SDHDO14521 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHDO14521 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.92■■□□□ 1.1
SDHDO14521 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SDHDO14521 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHDO14521 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHDO14521 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SDHDO14521 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SDHDO14521 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SDHDO14521 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.92■■□□□ 1.1
SDHDO14521 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SDHDO14521 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHDO14521 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDHDO14521 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SDHDO14521 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
SDHDO14521 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.91■■□□□ 1.1
SDHDO14521 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.91■■□□□ 1.1
SDHDO14521 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.91■■□□□ 1.1
SDHDO14521 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.91■■□□□ 1.1
SDHDO14521 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDHDO14521 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.9■■□□□ 1.1
SDHDO14521 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.9■■□□□ 1.1
SDHDO14521 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDHDO14521 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.9■■□□□ 1.1
SDHDO14521 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDHDO14521 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDHDO14521 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SDHDO14521 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDHDO14521 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SDHDO14521 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SDHDO14521 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDHDO14521 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SDHDO14521 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.9■■□□□ 1.1
SDHDO14521 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.89■■□□□ 1.09
SDHDO14521 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.89■■□□□ 1.09
SDHDO14521 AC011551.1-201ENST00000614101 683 ntBASIC21.89■■□□□ 1.09
SDHDO14521 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SDHDO14521 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SDHDO14521 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SDHDO14521 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SDHDO14521 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SDHDO14521 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms