Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC106739.1-201ENST00000617035 715 ntBASIC20.62■□□□□ 0.89
NPIPA3F8WFD2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
NPIPA3F8WFD2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA3F8WFD2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.62■□□□□ 0.89
NPIPA3F8WFD2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 AC141586.4-201ENST00000624558 1573 ntBASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA3F8WFD2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
NPIPA3F8WFD2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 LINC00543-201ENST00000567234 1845 ntBASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA3F8WFD2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 AC135279.3-201ENST00000610945 1311 ntBASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA3F8WFD2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.58■□□□□ 0.88
NPIPA3F8WFD2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 AC142381.2-201ENST00000566120 298 ntBASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
NPIPA3F8WFD2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 AC024257.2-201ENST00000549699 147 ntBASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA3F8WFD2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPA3F8WFD2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 AL161729.1-201ENST00000604104 1402 ntBASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA3F8WFD2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NPIPA3F8WFD2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NPIPA3F8WFD2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA3F8WFD2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA3F8WFD2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NPIPA3F8WFD2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA3F8WFD2 DUX4L19-201ENST00000557448 1267 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms