Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC106739.1-201ENST00000617035 715 ntBASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 AC141586.4-201ENST00000624558 1573 ntBASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPIPA2E9PIF3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.6■□□□□ 0.89
NPIPA2E9PIF3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 LINC00543-201ENST00000567234 1845 ntBASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPIPA2E9PIF3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 AC135279.3-201ENST00000610945 1311 ntBASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPIPA2E9PIF3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.58■□□□□ 0.88
NPIPA2E9PIF3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 AC142381.2-201ENST00000566120 298 ntBASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
NPIPA2E9PIF3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 AC024257.2-201ENST00000549699 147 ntBASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPIPA2E9PIF3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPIPA2E9PIF3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 AL161729.1-201ENST00000604104 1402 ntBASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPIPA2E9PIF3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 DUX4L19-201ENST00000557448 1267 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms