Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SRRM4A7MD48 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SRRM4A7MD48 AC012676.1-201ENST00000574705 1949 ntBASIC18.27■□□□□ 0.52
SRRM4A7MD48 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRRM4A7MD48 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRRM4A7MD48 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SRRM4A7MD48 AC092068.2-201ENST00000590491 1708 ntBASIC18.27■□□□□ 0.52
SRRM4A7MD48 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.27■□□□□ 0.52
SRRM4A7MD48 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRRM4A7MD48 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SRRM4A7MD48 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.27■□□□□ 0.51
SRRM4A7MD48 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRRM4A7MD48 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SRRM4A7MD48 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.26■□□□□ 0.51
SRRM4A7MD48 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SRRM4A7MD48 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.26■□□□□ 0.51
SRRM4A7MD48 AC004448.1-201ENST00000458332 883 ntBASIC18.26■□□□□ 0.51
SRRM4A7MD48 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.26■□□□□ 0.51
SRRM4A7MD48 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.26■□□□□ 0.51
SRRM4A7MD48 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SRRM4A7MD48 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SRRM4A7MD48 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SRRM4A7MD48 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.25■□□□□ 0.51
SRRM4A7MD48 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SRRM4A7MD48 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SRRM4A7MD48 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.24■□□□□ 0.51
SRRM4A7MD48 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SRRM4A7MD48 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SRRM4A7MD48 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SRRM4A7MD48 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SRRM4A7MD48 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.23■□□□□ 0.51
SRRM4A7MD48 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM4A7MD48 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
SRRM4A7MD48 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM4A7MD48 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM4A7MD48 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SRRM4A7MD48 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.23■□□□□ 0.51
SRRM4A7MD48 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 DUSP8P3-201ENST00000399571 1760 ntBASIC18.22■□□□□ 0.51
SRRM4A7MD48 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.22■□□□□ 0.51
SRRM4A7MD48 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.22■□□□□ 0.51
SRRM4A7MD48 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.22■□□□□ 0.51
SRRM4A7MD48 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.22■□□□□ 0.51
SRRM4A7MD48 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SRRM4A7MD48 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SRRM4A7MD48 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SRRM4A7MD48 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.21■□□□□ 0.51
SRRM4A7MD48 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SRRM4A7MD48 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.21■□□□□ 0.5
SRRM4A7MD48 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SRRM4A7MD48 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.2■□□□□ 0.5
SRRM4A7MD48 AC137630.3-201ENST00000607245 391 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms