Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV6-1A0A0K0K1D8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV6-1A0A0K0K1D8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 AL592295.1-201ENST00000400984 884 ntBASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ALDH1A3-203ENST00000557963 1670 ntBASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-1A0A0K0K1D8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-1A0A0K0K1D8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 AC022413.1-201ENST00000624602 984 ntBASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-1A0A0K0K1D8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 RPS2P7-201ENST00000447334 885 ntBASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV6-1A0A0K0K1D8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-1A0A0K0K1D8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-1A0A0K0K1D8 ABHD17AP4-201ENST00000411545 909 ntBASIC16.96■□□□□ 0.31
TRBV6-1A0A0K0K1D8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-1A0A0K0K1D8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-1A0A0K0K1D8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-1A0A0K0K1D8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV6-1A0A0K0K1D8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.96■□□□□ 0.3
TRBV6-1A0A0K0K1D8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-1A0A0K0K1D8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV6-1A0A0K0K1D8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms