Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 MIR639-201ENST00000384974 98 ntBASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 AC242852.2-201ENST00000615738 1807 ntBASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRBV6-5A0A0K0K1A5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV6-5A0A0K0K1A5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-5A0A0K0K1A5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-5A0A0K0K1A5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ALDH1A3-203ENST00000557963 1670 ntBASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-5A0A0K0K1A5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-5A0A0K0K1A5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 AC009831.1-201ENST00000580420 1582 ntBASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-5A0A0K0K1A5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-5A0A0K0K1A5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-5A0A0K0K1A5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-5A0A0K0K1A5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-5A0A0K0K1A5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-5A0A0K0K1A5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms