Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 AC096631.2-201ENST00000436136 790 ntBASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 C9orf163-202ENST00000624034 2573 ntBASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV20A0A0B4J274 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV20A0A0B4J274 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TRAV20A0A0B4J274 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV20A0A0B4J274 AC110285.6-201ENST00000617652 491 ntBASIC19.12■□□□□ 0.65
TRAV20A0A0B4J274 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV20A0A0B4J274 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 MIR935-201ENST00000401179 91 ntBASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 AC092803.2-201ENST00000564287 1899 ntBASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV20A0A0B4J274 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 AC004448.1-201ENST00000458332 883 ntBASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV20A0A0B4J274 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 AC133561.4-201ENST00000566112 224 ntBASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV20A0A0B4J274 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV20A0A0B4J274 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV20A0A0B4J274 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV20A0A0B4J274 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV20A0A0B4J274 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV20A0A0B4J274 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV20A0A0B4J274 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV20A0A0B4J274 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRAV20A0A0B4J274 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 AC005837.3-201ENST00000612163 286 ntBASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV20A0A0B4J274 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV20A0A0B4J274 AC005703.6-201ENST00000623265 1329 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms