Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV34A0A0B4J273 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV34A0A0B4J273 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRAV34A0A0B4J273 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV34A0A0B4J273 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV34A0A0B4J273 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 DUSP8P3-201ENST00000399571 1760 ntBASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV34A0A0B4J273 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV34A0A0B4J273 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV34A0A0B4J273 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 GUSBP5-202ENST00000510805 1989 ntBASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 LINC00526-201ENST00000581067 1875 ntBASIC17.39■□□□□ 0.37
TRAV34A0A0B4J273 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 AC060814.1-201ENST00000554326 538 ntBASIC17.38■□□□□ 0.37
TRAV34A0A0B4J273 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms