Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 THA1P-201ENST00000590384 1145 ntBASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 AL033527.3-201ENST00000566366 1196 ntBASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 AC131274.2-201ENST00000580697 1507 ntBASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV12-3A0A0B4J271 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 PKD1P6-201ENST00000343738 4769 ntBASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 AC068473.5-201ENST00000616428 2072 ntBASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV12-3A0A0B4J271 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 C9orf163-202ENST00000624034 2573 ntBASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV12-3A0A0B4J271 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 KRT18P24-201ENST00000344739 1156 ntBASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.77■□□□□ 0.28
TRAV12-3A0A0B4J271 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV12-3A0A0B4J271 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRAV12-3A0A0B4J271 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 ANOS2P-203ENST00000472227 1816 ntBASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV12-3A0A0B4J271 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 MIR4281-201ENST00000580852 62 ntBASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 ALDH1A3-203ENST00000557963 1670 ntBASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms