Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 LINC01124-201ENST00000409786 2117 ntBASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 AC129492.7-201ENST00000622992 756 ntBASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV8-4A0A0B4J246 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 NTF6A-201ENST00000591175 560 ntBASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-4A0A0B4J246 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 KRT18P60-201ENST00000312876 1297 ntBASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV8-4A0A0B4J246 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 AC022616.5-201ENST00000518796 181 ntBASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV8-4A0A0B4J246 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-4A0A0B4J246 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV8-4A0A0B4J246 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV8-4A0A0B4J246 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TRAV8-4A0A0B4J246 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 AL121603.2-201ENST00000557373 2117 ntBASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 LONRF2P2-201ENST00000439212 571 ntBASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 AC139795.1-202ENST00000500444 432 ntBASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV8-4A0A0B4J246 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 AC090877.2-201ENST00000558441 1738 ntBASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 AC019171.1-201ENST00000601251 1056 ntBASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 AC074183.2-201ENST00000623112 922 ntBASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-4A0A0B4J246 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms