Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV5A0A0B4J1U4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.42■□□□□ 0.86
TRGV5A0A0B4J1U4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 AL031432.3-201ENST00000607698 485 ntBASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV5A0A0B4J1U4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 SUDS3P1-201ENST00000505831 966 ntBASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 AL138724.1-201ENST00000606771 1088 ntBASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 AC009086.3-201ENST00000623486 1008 ntBASIC20.4■□□□□ 0.86
TRGV5A0A0B4J1U4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRGV5A0A0B4J1U4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.39■□□□□ 0.85
TRGV5A0A0B4J1U4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRGV5A0A0B4J1U4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRGV5A0A0B4J1U4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 MIR4767-201ENST00000582827 78 ntBASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 AC011298.3-201ENST00000615796 283 ntBASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.38■□□□□ 0.85
TRGV5A0A0B4J1U4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV5A0A0B4J1U4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
TRGV5A0A0B4J1U4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 AC006455.2-201ENST00000429931 906 ntBASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 AF213884.3-201ENST00000563833 479 ntBASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV5A0A0B4J1U4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms