Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV26-1A0A087WT03 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV26-1A0A087WT03 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV26-1A0A087WT03 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 AC141586.4-201ENST00000624558 1573 ntBASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 AC021242.3-201ENST00000607598 1377 ntBASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV26-1A0A087WT03 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV26-1A0A087WT03 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV26-1A0A087WT03 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV26-1A0A087WT03 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV26-1A0A087WT03 AL139125.2-201ENST00000623134 1869 ntBASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 TSPY9P-201ENST00000440215 945 ntBASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 TSPY11P-201ENST00000442607 1045 ntBASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV26-1A0A087WT03 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 AL022069.1-201ENST00000568025 1636 ntBASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV26-1A0A087WT03 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 GUSBP5-201ENST00000418136 578 ntBASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 AC092028.1-203ENST00000608262 953 ntBASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms