Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV18A0A075B6X5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 AC137767.1-201ENST00000602918 1920 ntBASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV18A0A075B6X5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 ABHD17AP4-201ENST00000411545 909 ntBASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
TRAV18A0A075B6X5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 AL161729.1-201ENST00000604104 1402 ntBASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV18A0A075B6X5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 AC007029.1-201ENST00000604183 313 ntBASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 RAP2CP1-202ENST00000605179 643 ntBASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV18A0A075B6X5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms