Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AC004987.2-201ENST00000395959 1148 ntBASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AC016769.1-201ENST00000409132 1010 ntBASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CRYGFP-201ENST00000418459 633 ntBASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AC004840.1-201ENST00000636359 365 ntBASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
LINC01558Q9Y6Z2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC092117.2-201ENST00000623937 1659 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AL928654.5-201ENST00000624831 2501 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 DUSP5P1-201ENST00000441325 1139 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 NTF6G-201ENST00000591094 616 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 GPR32P1-201ENST00000601788 811 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AL136038.4-201ENST00000603606 1261 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms