Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 SRPK2P-201ENST00000523408 1100 ntBASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 DUT-207ENST00000559416 635 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 AC012617.1-204ENST00000586340 2305 ntBASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 AC080013.5-201ENST00000607044 679 ntBASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPBQ9Y5S2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 PSME2P2-201ENST00000453033 700 ntBASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 RN7SL684P-201ENST00000465665 294 ntBASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 BAP1-211ENST00000615113 489 ntBASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 AC104640.1-201ENST00000562617 2109 ntBASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPBQ9Y5S2 AC113367.3-201ENST00000508316 1912 ntBASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 RNU1-80P-201ENST00000459500 161 ntBASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC093700.1-201ENST00000503348 717 ntBASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 GPX3-202ENST00000517973 612 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC024075.2-201ENST00000598112 1473 ntBASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 HNRNPA1P42-201ENST00000458678 957 ntBASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42BPBQ9Y5S2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42BPBQ9Y5S2 CDK4P1-201ENST00000454213 828 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms