Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNRF3Q9ULT6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNRF3Q9ULT6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNRF3Q9ULT6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ZNRF3Q9ULT6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 FAM21EP-201ENST00000417804 985 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AP000244.1-201ENST00000424582 201 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 SERBP1P2-201ENST00000436888 1164 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 KNOP1P1-201ENST00000542108 989 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AC005777.1-201ENST00000588332 187 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AC138761.6-201ENST00000583997 1423 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 KRT8P43-201ENST00000406052 1458 ntBASIC17.12■□□□□ 0.33
ZNRF3Q9ULT6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 NHP2P1-201ENST00000335274 462 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 GEMIN8P4-201ENST00000380526 729 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 AC073210.1-201ENST00000414799 232 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 RN7SL128P-201ENST00000467883 305 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 AC023968.2-201ENST00000560593 1049 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 RN7SL556P-201ENST00000582856 298 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 AC091951.1-201ENST00000512854 2465 ntBASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF3Q9ULT6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms