Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DENND2AQ9ULE3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 FXNP2-201ENST00000411625 547 ntBASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AL807761.2-201ENST00000422849 729 ntBASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 AC009560.1-201ENST00000620208 434 ntBASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DENND2AQ9ULE3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AC069218.1-201ENST00000435269 762 ntBASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 SPCS2P2-201ENST00000603270 608 ntBASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 AC007326.1-201ENST00000604539 458 ntBASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.47■□□□□ 0.39
DENND2AQ9ULE3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
DENND2AQ9ULE3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms