Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HDAC6Q9UBN7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
HDAC6Q9UBN7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HDAC6Q9UBN7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HDAC6Q9UBN7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HDAC6Q9UBN7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HDAC6Q9UBN7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 CEP164P1-201ENST00000455142 418 ntBASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ALG3P1-201ENST00000508806 1114 ntBASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 BX088702.1-201ENST00000610784 235 ntBASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 AC027601.3-201ENST00000622907 509 ntBASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 AC006480.2-201ENST00000609770 1337 ntBASIC16.45■□□□□ 0.22
HDAC6Q9UBN7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 IGLV3-15-201ENST00000518356 244 ntBASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 AC242376.1-201ENST00000559033 726 ntBASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 MIR6727-201ENST00000620702 65 ntBASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 AC006453.1-201ENST00000636037 1257 ntBASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
HDAC6Q9UBN7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HDAC6Q9UBN7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms