Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 HIST2H2BB-201ENST00000449108 381 ntBASIC13.65□□□□□ -0.22
CNIH4Q9P003 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 BX088702.1-201ENST00000610784 235 ntBASIC13.65□□□□□ -0.22
CNIH4Q9P003 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 MIR6869-201ENST00000619434 62 ntBASIC13.65□□□□□ -0.22
CNIH4Q9P003 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 AC079781.5-202ENST00000641784 3743 ntBASIC13.65□□□□□ -0.22
CNIH4Q9P003 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.65□□□□□ -0.22
CNIH4Q9P003 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CNIH4Q9P003 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CNIH4Q9P003 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CNIH4Q9P003 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AC020910.5-201ENST00000623668 1865 ntBASIC13.64□□□□□ -0.23
CNIH4Q9P003 INE2-201ENST00000630399 1874 ntBASIC13.64□□□□□ -0.23
CNIH4Q9P003 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AL591846.1-201ENST00000451736 433 ntBASIC13.64□□□□□ -0.23
CNIH4Q9P003 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AL136301.1-201ENST00000615830 422 ntBASIC13.64□□□□□ -0.23
CNIH4Q9P003 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AP001002.3-201ENST00000623482 206 ntBASIC13.64□□□□□ -0.23
CNIH4Q9P003 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CNIH4Q9P003 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.64□□□□□ -0.23
CNIH4Q9P003 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNIH4Q9P003 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CNIH4Q9P003 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CNIH4Q9P003 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms