Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BLOC1S4Q9NUP1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 BRWD1P1-201ENST00000401091 371 ntBASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AL132994.2-201ENST00000603120 687 ntBASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AL118558.3-201ENST00000607414 1079 ntBASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BLOC1S4Q9NUP1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 AC007952.5-201ENST00000572818 1486 ntBASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 AC111170.3-201ENST00000624282 2464 ntBASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 MARK2P5-201ENST00000507649 634 ntBASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 ZNF767P-206ENST00000513792 565 ntBASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 AC013355.1-201ENST00000562625 723 ntBASIC16.04■□□□□ 0.16
BLOC1S4Q9NUP1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms