Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EBF4Q9BQW3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CLUHP2-201ENST00000426660 1303 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 MIR943-201ENST00000401286 94 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 IGHV3-42-201ENST00000520410 361 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 AL359711.2-201ENST00000563105 872 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 BX088702.1-201ENST00000610784 235 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CR383656.2-201ENST00000548656 2254 ntBASIC14.18□□□□□ -0.14
EBF4Q9BQW3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
EBF4Q9BQW3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AL031719.1-201ENST00000623365 2587 ntBASIC14.17□□□□□ -0.14
EBF4Q9BQW3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AL161932.2-201ENST00000435436 679 ntBASIC14.17□□□□□ -0.14
EBF4Q9BQW3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 DOC2GP-202ENST00000514950 1163 ntBASIC14.17□□□□□ -0.14
EBF4Q9BQW3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AP000437.1-201ENST00000624057 2085 ntBASIC14.17□□□□□ -0.14
EBF4Q9BQW3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EBF4Q9BQW3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms