Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 ARSEP1-201ENST00000420443 635 ntBASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 AC022137.2-201ENST00000503482 481 ntBASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 CU634019.7-201ENST00000624153 1185 ntBASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 FP236241.2-201ENST00000624906 1185 ntBASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 AL138709.1-201ENST00000614840 1693 ntBASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 FLJ16779-201ENST00000612722 7638 ntBASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CHAMP1Q96JM3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 CRB3P1-201ENST00000449338 276 ntBASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 GPR53P-205ENST00000457298 1084 ntBASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 AC135782.3-201ENST00000562782 2105 ntBASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 MIR4683-201ENST00000579659 81 ntBASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHAMP1Q96JM3 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 AC004623.1-201ENST00000624592 2127 ntBASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHAMP1Q96JM3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms