Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CAB39L-201ENST00000347776 3361 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CTNNA2-219ENST00000629316 3167 ntTSL 2 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
SVIPQ8NHG7 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ADCY5-210ENST00000491190 3962 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC019322.4-201ENST00000623470 3930 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 MSTO2P-201ENST00000314835 1709 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 LINC01672-203ENST00000432429 1686 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 SRGAP2C-202ENST00000367123 7204 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 KRT8P10-201ENST00000450021 1447 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 PPFIA2-227ENST00000552948 3976 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 SPDYE22P-201ENST00000582158 798 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC016590.3-201ENST00000611171 753 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC093028.1-201ENST00000622998 982 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC087821.1-201ENST00000623639 567 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 BTN2A3P-203ENST00000465856 2483 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 NEK8-201ENST00000268766 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 FAXC-201ENST00000389677 11508 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 CHRNA1-202ENST00000348749 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC016831.5-201ENST00000605249 1998 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 AC087392.3-202ENST00000358446 1754 ntBASIC8.66□□□□□ -1.02
SVIPQ8NHG7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SVIPQ8NHG7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 TFP1-202ENST00000475455 1573 ntBASIC8.65□□□□□ -1.02
SVIPQ8NHG7 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AC124944.3-201ENST00000607976 1304 ntBASIC8.65□□□□□ -1.02
SVIPQ8NHG7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms