Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC140658.4-201ENST00000561990 352 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AC020922.3-201ENST00000595064 547 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AL353770.1-201ENST00000614915 403 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 OR2I1P-210ENST00000642037 4691 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AC015909.3-201ENST00000572855 1794 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 AC116345.2-201ENST00000512837 523 ntBASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 PHBP15-201ENST00000574228 665 ntBASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 LINC01815-202ENST00000641468 1409 ntBASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 FRMPD2B-201ENST00000431305 1347 ntBASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ARHGEF39Q8N4T4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 HSPA7-201ENST00000445535 1927 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 RPS9P1-201ENST00000419943 583 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 Z97180.1-201ENST00000445173 988 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 RN7SL258P-201ENST00000478664 300 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 POU5F1P2-201ENST00000521750 823 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms