Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC126915.1-201ENST00000522847 1038 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC106872.11-201ENST00000605838 421 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC004923.1-202ENST00000642106 209 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 CICP16-201ENST00000502609 2813 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 HSPA7-201ENST00000445535 1927 ntBASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.31■□□□□ 0.04
SCUBE3Q8IX30 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 Z97985.1-201ENST00000332270 946 ntBASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DPM3-202ENST00000368399 517 ntBASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 VDAC1P1-201ENST00000439229 848 ntBASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 RN7SL163P-201ENST00000583100 276 ntBASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.3■□□□□ 0.04
SCUBE3Q8IX30 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC040160.2-201ENST00000623816 1675 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms