Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC079328.1-201ENST00000560358 952 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC016629.1-201ENST00000596579 586 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC018629.1-201ENST00000623381 1736 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H3F3CQ6NXT2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MAGEA5-201ENST00000446757 942 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 RN7SL258P-201ENST00000478664 300 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC242376.1-201ENST00000559033 726 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC027237.1-201ENST00000560942 655 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 FGFR3P5-201ENST00000564496 886 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MIR3907-201ENST00000579424 151 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC092299.1-201ENST00000632679 757 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC015688.4-201ENST00000580780 1647 ntBASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H3F3CQ6NXT2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms