Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AC091804.1-201ENST00000486888 567 ntBASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AP001258.2-201ENST00000529891 490 ntBASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AC009884.2-201ENST00000603110 324 ntBASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 AC011474.4-201ENST00000623523 2076 ntBASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 MST1P2-201ENST00000457982 2291 ntBASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TTC39BQ5VTQ0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AGGF1P1-201ENST00000509500 2073 ntBASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AC005730.2-201ENST00000564549 1184 ntBASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AC244517.3-201ENST00000616254 1235 ntBASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AC009093.10-201ENST00000641956 1442 ntBASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TTC39BQ5VTQ0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AC139712.1-201ENST00000378256 1875 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 MBLAC2-202ENST00000514906 1936 ntBASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TTC39BQ5VTQ0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms