Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 LILRP2-202ENST00000413572 1383 ntBASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RIF1Q5UIP0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 METTL7AP1-201ENST00000547343 496 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AL591471.1-201ENST00000621855 229 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PHBP10-201ENST00000416467 784 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 RNA5SP420-201ENST00000516997 137 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AC009041.4-201ENST00000620075 638 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 AC138627.1-201ENST00000641127 1257 ntBASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RIF1Q5UIP0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AL591499.1-201ENST00000307155 1153 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RIF1Q5UIP0 OR4C14P-201ENST00000440929 923 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AF186996.6-201ENST00000485294 149 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 TBC1D3P6-201ENST00000505954 962 ntBASIC13.8□□□□□ -0.2
RIF1Q5UIP0 AC104117.4-201ENST00000521486 847 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms