Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 AC140479.7-201ENST00000636301 2332 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 RPL8P2-201ENST00000430538 502 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 RN7SL277P-201ENST00000481521 288 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 AC008723.1-201ENST00000506922 207 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.63■□□□□ 0.25
USH1GQ495M9 AC026803.1-201ENST00000569130 274 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
USH1GQ495M9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.63■□□□□ 0.25
USH1GQ495M9 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 AC006453.1-201ENST00000636037 1257 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.63■□□□□ 0.25
USH1GQ495M9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 OR2I1P-209ENST00000641730 5365 ntBASIC16.63■□□□□ 0.25
USH1GQ495M9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USH1GQ495M9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
USH1GQ495M9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.62■□□□□ 0.25
USH1GQ495M9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
USH1GQ495M9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.62■□□□□ 0.25
USH1GQ495M9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.62■□□□□ 0.25
USH1GQ495M9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 AC139749.1-202ENST00000617529 3139 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.62■□□□□ 0.25
USH1GQ495M9 AC026320.2-201ENST00000434379 478 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 AL161932.2-201ENST00000435436 679 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.62■□□□□ 0.25
USH1GQ495M9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms