Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AL442647.2-201ENST00000429864 857 ntBASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AL359711.2-201ENST00000563105 872 ntBASIC11.24□□□□□ -0.61
HIST1H1AQ02539 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AL132655.2-201ENST00000596276 594 ntBASIC11.24□□□□□ -0.61
HIST1H1AQ02539 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AC133539.2-201ENST00000604757 467 ntBASIC11.24□□□□□ -0.61
HIST1H1AQ02539 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AC007541.1-201ENST00000570282 1469 ntBASIC11.24□□□□□ -0.61
HIST1H1AQ02539 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC087499.6-201ENST00000411576 835 ntBASIC11.23□□□□□ -0.61
HIST1H1AQ02539 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 SERBP1P5-201ENST00000510079 1181 ntBASIC11.23□□□□□ -0.61
HIST1H1AQ02539 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC092552.1-201ENST00000547243 906 ntBASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.23□□□□□ -0.61
HIST1H1AQ02539 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms