Protein–RNA interactions for Protein: Q01628

IFITM3, Interferon-induced transmembrane protein 3, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3Q01628 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 AC026150.2-201ENST00000564693 1156 ntBASIC12.54□□□□□ -0.4
IFITM3Q01628 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.54□□□□□ -0.4
IFITM3Q01628 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
IFITM3Q01628 AC139712.1-201ENST00000378256 1875 ntBASIC12.54□□□□□ -0.4
IFITM3Q01628 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
IFITM3Q01628 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
IFITM3Q01628 AC093525.8-201ENST00000624099 1342 ntBASIC12.54□□□□□ -0.4
IFITM3Q01628 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.54□□□□□ -0.4
IFITM3Q01628 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
IFITM3Q01628 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFITM3Q01628 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
IFITM3Q01628 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 EGLN3-205ENST00000547327 2849 ntBASIC12.53□□□□□ -0.4
IFITM3Q01628 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.53□□□□□ -0.4
IFITM3Q01628 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 USP17L6P-201ENST00000382470 1197 ntBASIC12.53□□□□□ -0.4
IFITM3Q01628 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.53□□□□□ -0.4
IFITM3Q01628 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 RPL13P2-201ENST00000440687 659 ntBASIC12.53□□□□□ -0.4
IFITM3Q01628 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.53□□□□□ -0.4
IFITM3Q01628 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 AP000842.3-202ENST00000569238 1080 ntBASIC12.53□□□□□ -0.4
IFITM3Q01628 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.53□□□□□ -0.4
IFITM3Q01628 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.53□□□□□ -0.4
IFITM3Q01628 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.53□□□□□ -0.4
IFITM3Q01628 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
IFITM3Q01628 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
IFITM3Q01628 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IFITM3Q01628 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.52□□□□□ -0.4
IFITM3Q01628 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
IFITM3Q01628 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
IFITM3Q01628 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.52□□□□□ -0.4
IFITM3Q01628 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.52□□□□□ -0.4
IFITM3Q01628 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
IFITM3Q01628 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 SALL4P6-201ENST00000429385 1691 ntBASIC12.52□□□□□ -0.4
IFITM3Q01628 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.52□□□□□ -0.4
IFITM3Q01628 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IFITM3Q01628 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.52□□□□□ -0.41
IFITM3Q01628 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IFITM3Q01628 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFITM3Q01628 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.52□□□□□ -0.41
IFITM3Q01628 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
IFITM3Q01628 CRYGEP-201ENST00000412192 528 ntBASIC12.52□□□□□ -0.41
IFITM3Q01628 TOMM22P5-201ENST00000416399 439 ntBASIC12.52□□□□□ -0.41
IFITM3Q01628 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
IFITM3Q01628 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.52□□□□□ -0.41
IFITM3Q01628 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.52□□□□□ -0.41
IFITM3Q01628 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
IFITM3Q01628 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.52□□□□□ -0.41
IFITM3Q01628 AC131206.1-201ENST00000538078 1211 ntBASIC12.52□□□□□ -0.41
IFITM3Q01628 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.52□□□□□ -0.41
IFITM3Q01628 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IFITM3Q01628 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.52□□□□□ -0.41
IFITM3Q01628 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.52□□□□□ -0.41
IFITM3Q01628 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
IFITM3Q01628 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms